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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901837.1_cds_XP_016451875.1_46174
CDS Infomation

[gene=LOC107776490] [db_xref=GeneID:107776490] [protein=ribosomal RNA small subunit methyltransferase I-like] [protein_id=XP_016451875.1] [location=complement(join(8404..8505,9939..10112,11182..11224,11640..11784,11884..11992,12266..12394,12472..12568,13455..13522,13638..13874))] [gbkey=CDS]
Sequence

ATGCTGGTACGGCGTTATAATCCCATGTCTATTTTATCCTCCGCCGTCTTCAGCCCAGTT
CACCGGCAGTTTAGGAGATGTCGTCTTCCATTGTTGCGACCCCACTTCCCACCTTCACTT
CTTTGTACCACCATATCCAGTGTCCCCACAATTCTCACCACTTCATTCTACTCTACTAAC
AGTGCAGAAAGCTCCACTACTGATGAACTGCAGCATCACCTATCAAATTCTAAGCAAGGT
CCTTTGAAACCAGGTTTATATCTAGTTGGAACCCCAATTGGCAATCTTGAAGATATTACT
CTCAGGGCTTTGCGAGTCTTGAAATCGGCAGATGTGATTCTTTCTGAAGATACAAGGCAT
TCTGGAAAATTGCTACACTATTACAACATTAAAACTCCTCTTCTTAGTTATCACAAGTTC
AATGAATCTCAAAGAGCACAAATGGTGCTGAGGAAACTACAAGATGGTGAAATTGTCGCC
CTGATCAGCGACGCTGGCACACCAGGCATCAGTGACCCTGGAATGGAACTGGCTAAGCTG
TGCGTGGATAAAAATGTACTTGTTGTTCCGATTCCTGGGCCTTCTGCTGTGGTAACTGCT
CTTTCGGCCTCTGGCTTACCTACTAATGAGTTCACATTTGTTGGTTTTCTTCCAAAGCAT
AATTCTTCGAGGAAAGAGAGGCTGATACTTTCAGCAAATGAATCAGCCACACAGATTTTC
TTCATTCCACCTCACAGGCTTTCTCAATTTCTTGAAGAGGCTGCTGCTATATTTGGTGAG
AGTAGGGGGTGTGTTATGGCTCGGGAGATGACCAAAGTTCATGAGGAGTTTTGGCGTGGC
ACCATCGGCGAAGCCAAAGAGGCATTCTTGGCACGCCAACTGAAGGGCGAAATTACTTTC
TTGATTGAAGGCAAATCGATCAGTATAGATGAGAGTCCATCAGAGTCCCAGCTGGAGAAT
GAGTTGAGAGAGCTGATTTCGGAGGGACATTCTCTTTCAATGGCCGTCAAGTTGGTAGCA
AATGGGAAGTCGGTGAAACGAAAAGCAATATATTCTCTTGCATTGAGGAAATTTGGAGGG
CAACTAGAATCAGAGGATGAATAG

Peptide Sequence

PEP ID

XP_016451875.1
PEP Infomation

PREDICTED: ribosomal RNA small subunit methyltransferase I-like [Nicotiana tabacum]
Sequence

MLVRRYNPMSILSSAVFSPVHRQFRRCRLPLLRPHFPPSLLCTTISSVPTILTTSFYSTN
SAESSTTDELQHHLSNSKQGPLKPGLYLVGTPIGNLEDITLRALRVLKSADVILSEDTRH
SGKLLHYYNIKTPLLSYHKFNESQRAQMVLRKLQDGEIVALISDAGTPGISDPGMELAKL
CVDKNVLVVPIPGPSAVVTALSASGLPTNEFTFVGFLPKHNSSRKERLILSANESATQIF
FIPPHRLSQFLEEAAAIFGESRGCVMAREMTKVHEEFWRGTIGEAKEAFLARQLKGEITF
LIEGKSISIDESPSESQLENELRELISEGHSLSMAVKLVANGKSVKRKAIYSLALRKFGG
QLESEDE

Transcript Sequence

Gene sequence data has not been registered.